Commit a6bee657 authored by Uladzislava KHAURATOVICH's avatar Uladzislava KHAURATOVICH 💬
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# W-SNPs in females and males of all avaliable species
We want to check for W-SNPs in males and females of different species. We will use RNA from heads of males and female. It will allow to have a representation how sex chromosomes are different in A.sinica, A.franciscana, A.urmiana, and A.kazakhastan and how the level of differentiation is different in them.
We will also check for W-SNPs in parthenogenetic (asexual) species which is going to prove they have the same sex chromosomes.
## 1. Transform raw bam files into fasta
Location of all the raw reads [Beatriz's table](https://git.ist.ac.at/bvicoso/artemia_zw_sexasex_2020/-/blob/master/UsefulData_July2021.md#rna-seq-data-head)
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