Commit b972fbe9 authored by Christoph Sommer's avatar Christoph Sommer
Browse files

update doc 4

parent 2a0372cd
......@@ -6,7 +6,7 @@
Morse and Watson (Jonas group, unpublished)
### 1. Convert your images (.ims; or other) to .h5 for pixel classification in ilastik
### 1. Convert your images (.ims; or other) to hdf5 (.h5) for pixel classification in ilastik
---
Use the ImageJ macro `img2h5.ijm` to convert .ims files to ilastik .h5 files. Note,
......@@ -15,7 +15,7 @@ that the `ilastik` update site needs to be enabled in Fiji.
Choose a folder with images and a filetype (e. g. .ims). If your data is stored in
multi-resolution, choose a resolution level (1: original resolution; 2 (default): down scaling by factor of 2).
### 2. Use ilastik pixel classificaiton
### 2. Use ilastik pixel classification
---
Use `Pixel Classification` workflow.
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