Commit 7a44c26e authored by Christoph Sommer's avatar Christoph Sommer
Browse files

update readme

parent 263dbd4a
......@@ -13,7 +13,7 @@ Use `Pixel Classification` workflow.
### 3. Convert probability maps to dendrite objects and save as .swc for import in Imaris
Command line tool:
Trace dendrite and spine from ilastik segmentation and output .swc file for import into Imaris
Trace dendrite and spine from ilastik dendrite probability maps and output .swc file for import into Imaris
```
usage: ilastik2dendrite.py [-h] [-ms MIN_SIZE] [-rl RESOLUTION_LEVEL]
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