Commit edde9cb6 authored by Beatriz Vicoso's avatar Beatriz Vicoso
Browse files

Update BarbCarpSynteny.md

parent be13028d
......@@ -13,6 +13,11 @@ nohup wget ftp://download.cncb.ac.cn/gwh/Animals/Puntigrus_tetrazona_the_genome_
gzip -d GWHACFJ00000000.genome.fasta.gz
```
Make table of P. tetrazona scaffolds and their corresponding chromosome:
```
grep '>' GWHACFJ00000000.genome.fasta | perl -pi -e 's/>//gi' | perl -pi -e 's/\tOriSeqID=/ /gi' | perl -pi -e 's/\t.*//gi' | sort > Ptetra_scaf_chr.joinable
```
## BLAT
```
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment