Commit 3f8d92c5 authored by Beatriz Vicoso's avatar Beatriz Vicoso
Browse files

Update dNdS.md

parent 9c87bd08
......@@ -47,6 +47,10 @@ And make three lists for the three analyses:
## Get dS values
```
module load blat/20170224
module load gblocks/0.91b
module load muscle
perl dnds_estimate.pl List_barb_subA.txt Barb.trinity.fasta.long.500bp_min_unwrapped.fasta.cds Cyprinus_carpio_capital.fa.cds dS_a
perl dnds_estimate.pl List_barb_subB.txt Barb.trinity.fasta.long.500bp_min_unwrapped.fasta.cds Cyprinus_carpio_capital.fa.cds dS_b
perl dnds_estimate.pl List_subA_subB.txt Cyprinus_carpio_capital.fa.cds Cyprinus_carpio_capital.fa.cds dS_ab
......
Supports Markdown
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment